Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-488 in IDC Breast Radvanyi Cluster 35 Table contains all genes in the IDC Breast Radvanyi cluster number 35. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-488 50939 IMPG2 interphotoreceptor matrix proteoglycan 2 [Source:HGNC Symbol;Acc:18362] zzz999 6999 TDO2 tryptophan 2,3-dioxygenase [Source:HGNC Symbol;Acc:11708] T 57718 PPP4R4 protein phosphatase 4, regulatory subunit 4 [Source:HGNC Symbol;Acc:23788] zzz999 51023 MRPS18C mitochondrial ribosomal protein S18C [Source:HGNC Symbol;Acc:16633] zzz999 3196 TLX2 T-cell leukemia homeobox 2 [Source:HGNC Symbol;Acc:5057] zzz999 7473 WNT3 wingless-type MMTV integration site family, member 3 [Source:HGNC Symbol;Acc:12782] zzz999 129880 BBS5 Bardet-Biedl syndrome 5 [Source:HGNC Symbol;Acc:970] zzz999 219285 SAMD9L sterile alpha motif domain containing 9-like [Source:HGNC Symbol;Acc:1349] zzz999 151313 FAHD2B fumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:25318] zzz999 11189 CELF3 CUGBP, Elav-like family member 3 [Source:HGNC Symbol;Acc:11967] P T 6954 TCP11 t-complex 11 homolog (mouse) [Source:HGNC Symbol;Acc:11658] zzz999 57405 SPC25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24031] zzz999 157777 C8orf45 chromosome 8 open reading frame 45 [Source:HGNC Symbol;Acc:26368] zzz999 91862 MARVELD3 MARVEL domain containing 3 [Source:HGNC Symbol;Acc:30525] zzz999 115201 ATG4A ATG4 autophagy related 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:16489] P T 10656 KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 [Source:HGNC Symbol;Acc:18117] P T 6910 TBX5 T-box 5 [Source:HGNC Symbol;Acc:11604] T 1586 CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2593] zzz999 6493 SIM2 single-minded homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:10883] P T 29930 PCDHB1 protocadherin beta 1 [Source:HGNC Symbol;Acc:8680] zzz999 9465 AKAP7 A kinase (PRKA) anchor protein 7 [Source:HGNC Symbol;Acc:377] zzz999 5429 POLH polymerase (DNA directed), eta [Source:HGNC Symbol;Acc:9181] zzz999 133121 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:23409] T 9688 NUP93 nucleoporin 93kDa [Source:HGNC Symbol;Acc:28958] zzz999 145447 ABHD12B abhydrolase domain containing 12B [Source:HGNC Symbol;Acc:19837] zzz999 3717 JAK2 Janus kinase 2 [Source:HGNC Symbol;Acc:6192] T 5281 PIGF phosphatidylinositol glycan anchor biosynthesis, class F [Source:HGNC Symbol;Acc:8962] zzz999 722 C4BPA complement component 4 binding protein, alpha [Source:HGNC Symbol;Acc:1325] zzz999 6526 SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038] P T 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] T 4014 LOR loricrin [Source:HGNC Symbol;Acc:6663] zzz999 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] zzz999 23020 SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) [Source:HGNC Symbol;Acc:30859] zzz999 90423 ATP6V1E2 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2 [Source:HGNC Symbol;Acc:18125] zzz999 2821 GPI glucose-6-phosphate isomerase [Source:HGNC Symbol;Acc:4458] zzz999 8863 PER3 period homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:8847] T 140462 ASB9 ankyrin repeat and SOCS box containing 9 [Source:HGNC Symbol;Acc:17184] zzz999 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] T 5523 PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha [Source:HGNC Symbol;Acc:9307] zzz999 154091 SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 [Source:HGNC Symbol;Acc:18067] T 170959 ZNF431 zinc finger protein 431 [Source:HGNC Symbol;Acc:20809] zzz999 54989 ZNF770 zinc finger protein 770 [Source:HGNC Symbol;Acc:26061] zzz999 5583 PRKCH protein kinase C, eta [Source:HGNC Symbol;Acc:9403] zzz999 6170 RPL39 ribosomal protein L39 [Source:HGNC Symbol;Acc:10350] zzz999 2160 F11 coagulation factor XI [Source:HGNC Symbol;Acc:3529] T 4606 MYBPC2 myosin binding protein C, fast type [Source:HGNC Symbol;Acc:7550] zzz999 3269 HRH1 histamine receptor H1 [Source:HGNC Symbol;Acc:5182] zzz999 8887 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 [Source:HGNC Symbol;Acc:11575] zzz999 150000 zzz999 zzz999 zzz999 90799 CEP95 centrosomal protein 95kDa [Source:HGNC Symbol;Acc:25141] zzz999 55233 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) [Source:HGNC Symbol;Acc:16015] zzz999 11340 EXOSC8 exosome component 8 [Source:HGNC Symbol;Acc:17035] zzz999 7881 KCNAB1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 [Source:HGNC Symbol;Acc:6228] P T 164656 TMPRSS6 transmembrane protease, serine 6 [Source:HGNC Symbol;Acc:16517] zzz999 51719 CAB39 calcium binding protein 39 [Source:HGNC Symbol;Acc:20292] zzz999 118812 MORN4 MORN repeat containing 4 [Source:HGNC Symbol;Acc:24001] zzz999 65056 GPBP1 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:29520] zzz999

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